if you have a trailing new line in the list box where you can enter custom Xcode Resource folders for iOS projects:
the directory where the jucer file is in is added as a resource folder to the generated xcode project. The result is, that the jucer file, JuceLibraryCode, the Builds directory and all that jazz end up in the .ipa file. Also it’s currently not possible to add paths with spaces. I tried escaping with backslash and putting into quotes, both did not work.